FastQCFastQC Report
Tue 19 Apr 2022
EGAF00003290545

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003290545
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1385421598
Sequences flagged as poor quality0
Sequence length100
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAGTCGG1197450.014.13395194
CGATCCG294350.09.7401066
TAAGTCG711450.08.1785194
ATCCGAC541050.05.68117578
Produced by FastQC (version 0.11.5)