FastQCFastQC Report
Tue 19 Apr 2022
EGAF00003290570

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003290570
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences980634771
Sequences flagged as poor quality0
Sequence length100
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAGTCGG2263950.071.47520494
TAAGTCG1888150.037.15144394
GAAGTCG1611950.025.59421794
CAAGTCG1121100.025.08678894
AAAGTCG1372350.019.30892294
ATAAGTC4649700.05.5493994
CTAAGTC4211650.05.415715794
Produced by FastQC (version 0.11.5)