FastQCFastQC Report
Tue 19 Apr 2022
EGAF00003290571

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003290571
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences980634771
Sequences flagged as poor quality0
Sequence length100
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAGTCGG2428300.066.1267194
TAAGTCG1928550.036.46335294
GAAGTCG1614900.024.92755194
CAAGTCG1205250.024.39203394
AAAGTCG1373100.018.10035594
CTAAGTC4237450.05.56686294
ATAAGTC4613500.05.45234694
Produced by FastQC (version 0.11.5)