FastQCFastQC Report
Tue 19 Apr 2022
EGAF00003290578

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003290578
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1394369213
Sequences flagged as poor quality0
Sequence length100
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAGTCGG2969500.067.80218594
TAAGTCG2488650.036.20018894
GAAGTCG2224500.024.2997194
CAAGTCG1544050.023.2526894
AAAGTCG1820200.016.95687394
ATAAGTC6585800.05.139755294
CTAAGTC5979600.05.136547694
Produced by FastQC (version 0.11.5)