FastQCFastQC Report
Tue 19 Apr 2022
EGAF00003290579

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003290579
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1394369213
Sequences flagged as poor quality0
Sequence length100
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAGTCGG3192850.061.4914994
TAAGTCG2548400.035.18360594
GAAGTCG2206500.023.19007594
CAAGTCG1651000.022.25596694
AAAGTCG1846800.015.37399994
GTCGGAT580200.05.338331794
CTAAGTC6040300.05.18297194
TCGGATC692800.05.074480594
ATAAGTC6500450.05.00117794
Produced by FastQC (version 0.11.5)