FastQCFastQC Report
Sun 11 Sep 2022
EGAF00003291846

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003291846
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1969028
Sequences flagged as poor quality0
Sequence length25-332
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAGGTCAATTTCACTGGTTAAAAGTAAGAGACAGCTGAACCCTCGTGG230781.1720503720617483No Hit
GCCATACTAGTCTTTGCCGCCTGCGAAGCAGCGGTGGGCCTAGCCCTACT227741.1566112823179762No Hit
AAATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGT167530.8508258897283331No Hit
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC19990.10152217236118531No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)