FastQCFastQC Report
Sat 10 Sep 2022
EGAF00003291849

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003291849
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1361693
Sequences flagged as poor quality0
Sequence length8-474
%GC44

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAGGTCAATTTCACTGGTTAAAAGTAAGAGACAGCTGAACCCTCGTGG222381.6331140719677637No Hit
AAATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGT91670.673206075084472No Hit
AAATCTTACCCCGCCTGTTTACCAAAACATCACCTCTAGCATCACCAGTA38000.2790643706033592No Hit
GGCAGGTCAATTTCACTGGTTAAAAAGTAAGAGACAGCTGAACCCTCGTG21170.1554682296229767No Hit
GACAGCTGAACCCTCGTGGAGCCATTCATACAGGTCCCTATTTAAGGAAC18730.13754935951055047No Hit
GCTGAACCCTCGTGGAGCCATTCATACAGGTCCCTATTTAAGGAACAAGT15960.11720703565341085No Hit
GTTTACCAAAAACATCACCTCTAGCATCACCAGTATTAGAGGCACCGCCT15480.11368201202473685No Hit
GTTAAAAGTAAGAGACAGCTGAACCCTCGTGGAGCCATTCATACAGGTCC14030.10303350314645077No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)