FastQCFastQC Report
Sat 10 Sep 2022
EGAF00003291859

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003291859
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1328651
Sequences flagged as poor quality0
Sequence length8-355
%GC44

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAGGTCAATTTCACTGGTTAAAAGTAAGAGACAGCTGAACCCTCGTGG86490.6509610123350676No Hit
AAATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGT73320.5518379168043377No Hit
AAATCTTACCCCGCCTGTTTACCAAAACATCACCTCTAGCATCACCAGTA28830.21698700411168925No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)