FastQCFastQC Report
Mon 5 Sep 2022
EGAF00003291860

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003291860
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1218202
Sequences flagged as poor quality0
Sequence length8-362
%GC44

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAGGTCAATTTCACTGGTTAAAAGTAAGAGACAGCTGAACCCTCGTGG265192.1768967708146922No Hit
AAATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGT173961.4280061927332248No Hit
AAATCTTACCCCGCCTGTTTACCAAAACATCACCTCTAGCATCACCAGTA64810.5320135741034738No Hit
GGCAGGTCAATTTCACTGGTTAAAAAGTAAGAGACAGCTGAACCCTCGTG26980.22147394274512766No Hit
AATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGTA15600.12805757994158604No Hit
GTTTACCAAAAACATCACCTCTAGCATCACCAGTATTAGAGGCACCGCCT14720.12083381902180428No Hit
ATTTCACTGGTTAAAAGTAAGAGACAGCTGAACCCTCGTGGAGCCATTCA13250.10876685475807789No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)