FastQCFastQC Report
Sat 10 Sep 2022
EGAF00003291864

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003291864
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1444614
Sequences flagged as poor quality0
Sequence length8-622
%GC44

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAGGTCAATTTCACTGGTTAAAAGTAAGAGACAGCTGAACCCTCGTGG231141.6000121831852663No Hit
AAATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGT107030.7408899539946311No Hit
GTTTACCAAAAACATCACCTCTAGCATCACCAGTATTAGAGGCACCGCCT23690.16398844258743167No Hit
GACAGCTGAACCCTCGTGGAGCCATTCATACAGGTCCCTATTTAAGGAAC17880.12377008668059425No Hit
GGCAGGTCAATTTCACTGGTTAAAAAGTAAGAGACAGCTGAACCCTCGTG15280.10577219935567564No Hit
GTTAAAAGTAAGAGACAGCTGAACCCTCGTGGAGCCATTCATACAGGTCC14510.10044205580175743No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)