FastQCFastQC Report
Sat 10 Sep 2022
EGAF00003291866

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003291866
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1370160
Sequences flagged as poor quality0
Sequence length8-623
%GC44

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAGGTCAATTTCACTGGTTAAAAGTAAGAGACAGCTGAACCCTCGTGG284512.076472820692474No Hit
AAATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGT170851.2469346645647224No Hit
GTTTACCAAAAACATCACCTCTAGCATCACCAGTATTAGAGGCACCGCCT15790.11524201553103287No Hit
AATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGTA14670.10706778770362586No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)