FastQCFastQC Report
Fri 9 Sep 2022
EGAF00003291869

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003291869
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1279253
Sequences flagged as poor quality0
Sequence length8-376
%GC44

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAGGTCAATTTCACTGGTTAAAAGTAAGAGACAGCTGAACCCTCGTGG103010.8052355554374311No Hit
AAATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGT70480.5509465289508799No Hit
AAATCTTACCCCGCCTGTTTACCAAAACATCACCTCTAGCATCACCAGTA24130.1886257057829843No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)