FastQCFastQC Report
Sun 4 Sep 2022
EGAF00003291870

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003291870
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences766410
Sequences flagged as poor quality0
Sequence length25-320
%GC44

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAGGTCAATTTCACTGGTTAAAAGTAAGAGACAGCTGAACCCTCGTGG95101.2408501976748738No Hit
AAATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGT67190.8766848031732363No Hit
GGCAGGTCAATTTCACTGGTCATTACAGAAATGCAAATCAAAACCACAAT12610.1645333437716105No Hit
AAATCTTACCCCGCCTGTTTACCAAAACATCACCTCTAGCATCACCAGTA8620.11247243642436816No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)