FastQCFastQC Report
Mon 5 Sep 2022
EGAF00003291873

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003291873
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1170485
Sequences flagged as poor quality0
Sequence length8-366
%GC44

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAGGTCAATTTCACTGGTTAAAAGTAAGAGACAGCTGAACCCTCGTGG165051.4100992323694879No Hit
AAATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGT134161.1461915359872188No Hit
AAATCTTACCCCGCCTGTTTACCAAAACATCACCTCTAGCATCACCAGTA48540.41469988936210206No Hit
GGCAGGTCAATTTCACTGGTTAAAAAGTAAGAGACAGCTGAACCCTCGTG20330.1736886846050996No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)