FastQCFastQC Report
Sun 11 Sep 2022
EGAF00003291875

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003291875
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1691249
Sequences flagged as poor quality0
Sequence length25-375
%GC44

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAGGTCAATTTCACTGGTTAAAAGTAAGAGACAGCTGAACCCTCGTGG287791.7016418043706159No Hit
AAATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGT193121.1418779848502498No Hit
AAATCTTACCCCGCCTGTTTACCAAAACATCACCTCTAGCATCACCAGTA24060.1422617249145454No Hit
GTTTACCAAAAACATCACCTCTAGCATCACCAGTATTAGAGGCACCGCCT22860.13516637703850823No Hit
GGCAGGTCAATTTCACTGGTTAAAAAGTAAGAGACAGCTGAACCCTCGTG18810.11121957795688275No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)