FastQCFastQC Report
Sun 4 Sep 2022
EGAF00003291886

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003291886
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences872009
Sequences flagged as poor quality0
Sequence length25-313
%GC44

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGT168131.9280764304038147No Hit
GGCAGGTCAATTTCACTGGTTAAAAGTAAGAGACAGCTGAACCCTCGTGG131631.5095027688934404No Hit
ATTCATACAGGTCCCTATTTAAGGAACAAGTGATTATGCTACCTTTGCAC16470.18887419739933878No Hit
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC12830.14713150896378363No Hit
AAATCTTACCCCGCCTGTTTACCAAAACATCACCTCTAGCATCACCAGTA11830.1356637374155542No Hit
ATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTACCC11790.135205026553625No Hit
ATACAGGTCCCTATTTAAGGAACAAGTGATTATGCTACCTTTGCACGGTT11190.12832436362468735No Hit
GTGGAGCCATTCATACAGGTCCCTATTTAAGGAACAAGTGATTATGCTAC10960.12568677616859458No Hit
ATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCC10840.12431064358280705No Hit
ATTTAAGGAACAAGTGATTATGCTACCTTTGCACGGTTAGGGTACCGCGG9070.10401268794244095No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)