FastQCFastQC Report
Sun 11 Sep 2022
EGAF00003291895

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003291895
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1519881
Sequences flagged as poor quality0
Sequence length8-360
%GC44

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAGGTCAATTTCACTGGTTAAAAGTAAGAGACAGCTGAACCCTCGTGG278711.8337619853133238No Hit
AAATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGT141490.9309281450324072No Hit
AAATCTTACCCCGCCTGTTTACCAAAACATCACCTCTAGCATCACCAGTA49170.32351216970275964No Hit
GGCAGGTCAATTTCACTGGTTAAAAAGTAAGAGACAGCTGAACCCTCGTG20400.13422103440993077No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)