FastQCFastQC Report
Sat 10 Sep 2022
EGAF00003291896

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003291896
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1363725
Sequences flagged as poor quality0
Sequence length8-448
%GC45

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAGGTCAATTTCACTGGTTAAAAGTAAGAGACAGCTGAACCCTCGTGG293412.1515334836568956No Hit
AAATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGT169641.2439458101890044No Hit
AAATCTTACCCCGCCTGTTTACCAAAACATCACCTCTAGCATCACCAGTA62690.4596967863755522No Hit
GGCAGGTCAATTTCACTGGTTAAAAGTAAGAGACAGCTGAACCCTTGTGG19560.1434306770059946No Hit
GGCAGGTCAATTTCACTGGTTAAAAAGTAAGAGACAGCTGAACCCTCGTG19290.14145080569762966No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)