FastQCFastQC Report
Sun 11 Sep 2022
EGAF00003291898

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003291898
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1713755
Sequences flagged as poor quality0
Sequence length25-366
%GC44

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAGGTCAATTTCACTGGTTAAAAGTAAGAGACAGCTGAACCCTCGTGG239541.397749386580929No Hit
AAATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGT181391.0584360074806491No Hit
AAATCTTACCCCGCCTGTTTACCAAAACATCACCTCTAGCATCACCAGTA27300.15929931641337297No Hit
GGCAGGTCAATTTCACTGGTTAAAAAGTAAGAGACAGCTGAACCCTCGTG21550.12574726259004348No Hit
GTTTACCAAAAACATCACCTCTAGCATCACCAGTATTAGAGGCACCGCCT19100.11145117009140747No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)