FastQCFastQC Report
Mon 5 Sep 2022
EGAF00003291899

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003291899
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1213593
Sequences flagged as poor quality0
Sequence length8-620
%GC44

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAGGTCAATTTCACTGGTTAAAAGTAAGAGACAGCTGAACCCTCGTGG208581.718698113782792No Hit
GCCATACTAGTCTTTGCCGCCTGCGAAGCAGCGGTGGGCCTAGCCCTACT178051.467131072773162No Hit
AAATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGT144681.1921624465533338No Hit
GGCAGGTCAATTTCACTGGTTAAAAAGTAAGAGACAGCTGAACCCTCGTG14340.11816152532191601No Hit
AATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGTA12930.10654313266474015No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)