FastQCFastQC Report
Sat 10 Sep 2022
EGAF00003291904

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003291904
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1430068
Sequences flagged as poor quality0
Sequence length25-332
%GC44

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGT158151.1058914680980205No Hit
GGCAGGTCAATTTCACTGGTTAAAAGTAAGAGACAGCTGAACCCTCGTGG150601.0530967758176535No Hit
ATTTCACTGGTTAAAAGTAAGAGACAGCTGAACCCTCGTGGAGCCATTCA15490.1083165276056803No Hit
AAATCTTACCCCGCCTGTTTACCAAAACATCACCTCTAGCATCACCAGTA15310.10705784620032054No Hit
GTTTACCAAAAACATCACCTCTAGCATCACCAGTATTAGAGGCACCGCCT14670.10258253453681923No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)