FastQCFastQC Report
Mon 5 Sep 2022
EGAF00003291905

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003291905
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1269687
Sequences flagged as poor quality0
Sequence length8-623
%GC44

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAGGTCAATTTCACTGGTTAAAAGTAAGAGACAGCTGAACCCTCGTGG266542.0992575335496073No Hit
AAATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGT171051.3471824158237424No Hit
GTTTACCAAAAACATCACCTCTAGCATCACCAGTATTAGAGGCACCGCCT24570.1935122593206042No Hit
AAATCTTACCCCGCCTGTTTACCAAAACATCACCTCTAGCATCACCAGTA13100.10317503447700102No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)