FastQCFastQC Report
Mon 5 Sep 2022
EGAF00003291906

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003291906
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1244568
Sequences flagged as poor quality0
Sequence length8-364
%GC44

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAGGTCAATTTCACTGGTTAAAAGTAAGAGACAGCTGAACCCTCGTGG194521.5629519640549976No Hit
AAATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGT112610.904811950813455No Hit
AAATCTTACCCCGCCTGTTTACCAAAACATCACCTCTAGCATCACCAGTA45210.36325857646990767No Hit
GGCAGGTCAATTTCACTGGTTAAAAAGTAAGAGACAGCTGAACCCTCGTG22270.17893759119630265No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)