FastQCFastQC Report
Sun 4 Sep 2022
EGAF00003291908

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003291908
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1147484
Sequences flagged as poor quality0
Sequence length25-319
%GC44

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGT116841.018227705135758No Hit
GGCAGGTCAATTTCACTGGTTAAAAGTAAGAGACAGCTGAACCCTCGTGG114650.9991424717033092No Hit
GGCAGGTCAATTTCACTGGTTAAAAAGTAAGAGACAGCTGAACCCTCGTG17340.15111321813637488No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)