FastQCFastQC Report
Sun 11 Sep 2022
EGAF00003291914

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003291914
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1931536
Sequences flagged as poor quality0
Sequence length25-306
%GC44

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAGGTCAATTTCACTGGTTAAAAGTAAGAGACAGCTGAACCCTCGTGG318791.650448140754301No Hit
AAATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGT208091.0773291308057422No Hit
AAATCTTACCCCGCCTGTTTACCAAAACATCACCTCTAGCATCACCAGTA36160.18720852212953837No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)