FastQCFastQC Report
Sat 10 Sep 2022
EGAF00003291917

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003291917
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1330665
Sequences flagged as poor quality0
Sequence length8-346
%GC44

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAGGTCAATTTCACTGGTTAAAAGTAAGAGACAGCTGAACCCTCGTGG238721.793990222933646No Hit
AAATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGT142001.0671356051297658No Hit
AAATCTTACCCCGCCTGTTTACCAAAACATCACCTCTAGCATCACCAGTA57600.4328662736301022No Hit
GGCAGGTCAATTTCACTGGTTAAAAAGTAAGAGACAGCTGAACCCTCGTG23360.17555132208331925No Hit
ATTTCACTGGTTAAAAGTAAGAGACAGCTGAACCCTCGTGGAGCCATTCA16260.12219454182683094No Hit
GTTTACCAAAAACATCACCTCTAGCATCACCAGTATTAGAGGCACCGCCT15020.11287589288062735No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)