FastQCFastQC Report
Mon 5 Sep 2022
EGAF00003291923

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003291923
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1262300
Sequences flagged as poor quality0
Sequence length8-615
%GC44

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAGGTCAATTTCACTGGTTAAAAGTAAGAGACAGCTGAACCCTCGTGG206211.6336053236156223No Hit
AAATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGT154721.2256991206527768No Hit
GTTTACCAAAAACATCACCTCTAGCATCACCAGTATTAGAGGCACCGCCT15560.12326705220629011No Hit
GGCAGGTCAATTTCACTGGTTAAAAAGTAAGAGACAGCTGAACCCTCGTG15100.11962291056008872No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)