FastQCFastQC Report
Sat 10 Sep 2022
EGAF00003291927

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003291927
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1443991
Sequences flagged as poor quality0
Sequence length8-349
%GC44

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAGGTCAATTTCACTGGTTAAAAGTAAGAGACAGCTGAACCCTCGTGG117900.8164870833682482No Hit
AAATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGT83160.5759038664368407No Hit
AAATCTTACCCCGCCTGTTTACCAAAACATCACCTCTAGCATCACCAGTA33830.2342812385949774No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)