FastQCFastQC Report
Sun 4 Sep 2022
EGAF00003291930

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003291930
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1133161
Sequences flagged as poor quality0
Sequence length25-332
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAGGTCAATTTCACTGGTTAAAAGTAAGAGACAGCTGAACCCTCGTGG94670.8354505670421061No Hit
AAATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGT92180.813476637476934No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)