FastQCFastQC Report
Sun 4 Sep 2022
EGAF00003291935

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003291935
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences803175
Sequences flagged as poor quality0
Sequence length25-296
%GC44

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAGGTCAATTTCACTGGTTAAAAGTAAGAGACAGCTGAACCCTCGTGG114001.4193668876645813No Hit
GCCATACTAGTCTTTGCCGCCTGCGAAGCAGCGGTGGGCCTAGCCCTACT91341.137236592274411No Hit
AAATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGT89121.1095962897251532No Hit
AAATCTTACCCCGCCTGTTTACCAAAACATCACCTCTAGCATCACCAGTA13550.16870545024434278No Hit
GTTTACCAAAAACATCACCTCTAGCATCACCAGTATTAGAGGCACCGCCT10250.12761851402247332No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)