FastQCFastQC Report
Mon 5 Sep 2022
EGAF00003291938

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003291938
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1158894
Sequences flagged as poor quality0
Sequence length8-619
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAGGTCAATTTCACTGGTTAAAAGTAAGAGACAGCTGAACCCTCGTGG183471.5831473801745457No Hit
AAATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGT140921.215986966883943No Hit
GGCAGGTCAATTTCACTGGTTAAAAAGTAAGAGACAGCTGAACCCTCGTG17440.15048831040630117No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)