FastQCFastQC Report
Mon 5 Sep 2022
EGAF00003291952

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003291952
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1208735
Sequences flagged as poor quality0
Sequence length8-622
%GC44

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAGGTCAATTTCACTGGTTAAAAGTAAGAGACAGCTGAACCCTCGTGG244752.024844155253219No Hit
AAATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGT169481.4021270170881128No Hit
GGCAGGTCAATTTCACTGGTTAAAAAGTAAGAGACAGCTGAACCCTCGTG14990.12401394846678553No Hit
GTTTACCAAAAACATCACCTCTAGCATCACCAGTATTAGAGGCACCGCCT14650.12120109039615798No Hit
AATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGTA13740.11367255850124303No Hit
AAATCTTACCCCGCCTGTTTACCAAAACATCACCTCTAGCATCACCAGTA12650.10465486645128998No Hit
AAATCTTACCCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAG12310.10184200838066243No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)