FastQCFastQC Report
Sat 10 Sep 2022
EGAF00003291960

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003291960
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1327784
Sequences flagged as poor quality0
Sequence length8-350
%GC44

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAGGTCAATTTCACTGGTTAAAAGTAAGAGACAGCTGAACCCTCGTGG212191.5980761931157477No Hit
AAATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGT168991.2727220692522279No Hit
AAATCTTACCCCGCCTGTTTACCAAAACATCACCTCTAGCATCACCAGTA56030.4219812861128015No Hit
GGCAGGTCAATTTCACTGGTTAAAAAGTAAGAGACAGCTGAACCCTCGTG29620.22307845251938568No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)