FastQCFastQC Report
Sun 11 Sep 2022
EGAF00003291964

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003291964
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1850590
Sequences flagged as poor quality0
Sequence length8-367
%GC44

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAGGTCAATTTCACTGGTTAAAAGTAAGAGACAGCTGAACCCTCGTGG348171.8813999859504267No Hit
AAATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGT195721.0576086545372017No Hit
AAATCTTACCCCGCCTGTTTACCAAAACATCACCTCTAGCATCACCAGTA80880.4370498057376296No Hit
GGCAGGTCAATTTCACTGGTTAAAAAGTAAGAGACAGCTGAACCCTCGTG27480.14849318325507002No Hit
GTTTACCAAAAACATCACCTCTAGCATCACCAGTATTAGAGGCACCGCCT21430.11580090673785116No Hit
GTTTACCAAAACATCACCTCTAGCATCACCAGTATTAGAGGCACCGCCTG20440.11045126148957901No Hit
GACAGCTGAACCCTCGTGGAGCCATTCATACAGGTCCCTATTTAAGGAAC20030.10823575184130466No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)