FastQCFastQC Report
Mon 5 Sep 2022
EGAF00003291966

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003291966
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1091954
Sequences flagged as poor quality0
Sequence length8-357
%GC45

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAGGTCAATTTCACTGGTTAAAAGTAAGAGACAGCTGAACCCTCGTGG201001.8407368808576186No Hit
AAATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGT127211.1649758139994908No Hit
AAATCTTACCCCGCCTGTTTACCAAAACATCACCTCTAGCATCACCAGTA44400.40661053487601123No Hit
GGCAGGTCAATTTCACTGGTTAAAAAGTAAGAGACAGCTGAACCCTCGTG14740.134987371262892No Hit
AATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGTA11850.10852105491623275No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)