FastQCFastQC Report
Mon 5 Sep 2022
EGAF00003291974

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003291974
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1212948
Sequences flagged as poor quality0
Sequence length8-381
%GC44

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAGGTCAATTTCACTGGTTAAAAGTAAGAGACAGCTGAACCCTCGTGG246792.0346296790958887No Hit
AAATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGT129861.07061473369015No Hit
AAATCTTACCCCGCCTGTTTACCAAAACATCACCTCTAGCATCACCAGTA49830.4108172815322668No Hit
GGCAGGTCAATTTCACTGGTTAAAAAGTAAGAGACAGCTGAACCCTCGTG21360.17609988227030343No Hit
GTTTACCAAAAACATCACCTCTAGCATCACCAGTATTAGAGGCACCGCCT18070.14897588354983066No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)