FastQCFastQC Report
Sat 10 Sep 2022
EGAF00003291975

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003291975
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1308685
Sequences flagged as poor quality0
Sequence length8-623
%GC44

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAGGTCAATTTCACTGGTTAAAAGTAAGAGACAGCTGAACCCTCGTGG319392.440541459556731No Hit
AAATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGT226891.7337250751708777No Hit
GGCAGGTCAATTTCACTGGTTAAAAGTAAGAGACAGCTGAACCCTTGTGG21650.16543324023733746No Hit
AAATCTTACCCCGCCTGTTTACCAAAACATCACCTCTAGCATCACCAGTA19330.14770552119111935No Hit
ACTCGGCAAATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCAT15420.11782820159167409No Hit
GTGTCATGCCCGCCTCTTCACGGGCAGGTCAATTTCACTGGTTAAAAGTA13750.10506730038168084No Hit
AATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGTA13330.10185797193365859No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)