FastQCFastQC Report
Mon 5 Sep 2022
EGAF00003291983

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003291983
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1237176
Sequences flagged as poor quality0
Sequence length25-305
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGT86740.7011128570227679No Hit
GGCAGGTCAATTTCACTGGTTAAAAGTAAGAGACAGCTGAACCCTCGTGG84830.6856744715384069No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)