FastQCFastQC Report
Sun 4 Sep 2022
EGAF00003292000

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003292000
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1151894
Sequences flagged as poor quality0
Sequence length25-337
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAGGTCAATTTCACTGGTTAAAAGTAAGAGACAGCTGAACCCTCGTGG205741.786101846176818No Hit
AAATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGT187591.6285352645295488No Hit
AAATCTTACCCCGCCTGTTTACCAAAACATCACCTCTAGCATCACCAGTA18780.16303583489453022No Hit
ATTCATACAGGTCCCTATTTAAGGAACAAGTGATTATGCTACCTTTGCAC13040.11320486086393367No Hit
ATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCC12390.10756198052945844No Hit
GACAGCTGAACCCTCGTGGAGCCATTCATACAGGTCCCTATTTAAGGAAC12250.10634659091895608No Hit
GCTGAACCCTCGTGGAGCCATTCATACAGGTCCCTATTTAAGGAACAAGT11580.10053008349726623No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)