FastQCFastQC Report
Sun 11 Sep 2022
EGAF00003293429

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003293429
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2078363
Sequences flagged as poor quality0
Sequence length126
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAGCATCCCCG26210.1261088654869241No Hit
CCCAAACCCACTCCACCTTACTACCAGACAACCTTAGCCAAACCATTTAC24240.11663025178950935No Hit
CCGTCATCTACTCTACCATCTTTGCAGGCACACTCATCACAGCGCTAAGC21070.10137786325102978No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)