FastQCFastQC Report
Sun 4 Sep 2022
EGAF00003296705

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003296705
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences932449
Sequences flagged as poor quality0
Sequence length25-305
%GC44

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAATCTTACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGT52090.5586364508943653No Hit
GGCAGGTCAATTTCACTGGTTAAAAGTAAGAGACAGCTGAACCCTCGTGG50270.5391179571215156No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)