Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00003435195 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 31121728 |
Total Bases | 3.1 Gbp |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GCTACCTTTGCACGGTTAGGGTACCGCGGCCGTTAAACATGTGTCACTGG | 83729 | 0.2690371177333084 | No Hit |
GTAAGATTTGCCGAGTTCCTTTTACTTTTTTTAACCTTTCCTTATGAGCA | 46964 | 0.15090421714372673 | No Hit |
GTCCAATTGGGTGTGAGGAGTTCAGTTATATGTTTGGGATTTTTTAGGTA | 43120 | 0.13855271789535592 | No Hit |
GATAGATTGGTCCAATTGGGTGTGAGGAGTTCAGTTATATGTTTGGGATT | 35862 | 0.1152313907505393 | No Hit |
GTTAATTGTCAGTTCAGTGTTTTAATCTGACGCAGGCTTATGCGGAGGAG | 32506 | 0.10444792782714378 | No Hit |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATGTCAGAATCTCGTAT | 32221 | 0.10353216890784471 | TruSeq Adapter, Index 15 (97% over 40bp) |
CTTGGTTATAATTTTTCATCTTTCCCTTGCGGTACTATATCTATTGCGCC | 31949 | 0.10265818144802243 | No Hit |