FastQCFastQC Report
Wed 28 Dec 2022
EGAF00003442403

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003442403
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences490019954
Sequences flagged as poor quality0
Sequence length151
%GC23

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTAAATACAACAACATCCATCTCAAAAAAATCACCAACAATAACCAAAAT43330860.8842672557779147No Hit
CTAAATACAACATACACTAAACTTTATAAAATACCCTCACTTTCCTACTC22804410.4653771711508711No Hit
CTAAATACAACTAAATTATTCACATTTACCTTACATATACACACAAAAAA18415730.37581592034515393No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)