FastQCFastQC Report
Sat 3 Sep 2022
EGAF00003442609

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003442609
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1013045
Sequences flagged as poor quality0
Sequence length51
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN32560.32140724252130953No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNNNNNN10800.10660928191738768No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNANNNNNN10380.10246336539837815No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)