FastQCFastQC Report
Sun 4 Sep 2022
EGAF00003442698

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003442698
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2151447
Sequences flagged as poor quality0
Sequence length51
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACGCTACGCTATCTCGTATGCCGTC476692.215671592188885No Hit
TCTTATACACATCTCCGAGCCCACGAGACGCTACGCTATCTCGTATGCCGT113930.5295505768908088No Hit
CTCTTATACACATCTCCGAGCCCACGAGACGCTACGCTATCTCGTATGCCG42730.19861051655002426No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)