FastQCFastQC Report
Sat 3 Sep 2022
EGAF00003442710

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003442710
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1168520
Sequences flagged as poor quality0
Sequence length51
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCTCGTATGCCGTC337782.89066511484613No Hit
TCTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCTCGTATGCCGT34450.29481737582583095No Hit
CTCTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCTCGTATGCCG14000.11980967377537396No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)