FastQCFastQC Report
Sat 3 Sep 2022
EGAF00003442822

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003442822
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1213243
Sequences flagged as poor quality0
Sequence length51
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACTGGGTTTCATCTCGTATGCCGTC193071.5913547409710997No Hit
TCTTATACACATCTCCGAGCCCACGAGACTGGGTTTCATCTCGTATGCCGT39250.323513096716816No Hit
CTCTTATACACATCTCCGAGCCCACGAGACTGGGTTTCATCTCGTATGCCG18980.15644021848879408No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)