FastQCFastQC Report
Sat 10 Sep 2022
EGAF00003442825

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003442825
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3836262
Sequences flagged as poor quality0
Sequence length51
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN126190.3289399941922632No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNNNNNN41970.10940337234526736No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNANNNNNN39410.10273020977190817No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)