FastQCFastQC Report
Sat 3 Sep 2022
EGAF00003442894

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003442894
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1372434
Sequences flagged as poor quality0
Sequence length51
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACTGCTGGGTATCTCGTATGCCGTC288622.10297908679033No Hit
TCTTATACACATCTCCGAGCCCACGAGACTGCTGGGTATCTCGTATGCCGT29030.21152201125882922No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)