FastQCFastQC Report
Fri 2 Sep 2022
EGAF00003443030

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003443030
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences706944
Sequences flagged as poor quality0
Sequence length51
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACGCTACGCTATCTCGTATGCCGTC370115.2353510320478005No Hit
TCTTATACACATCTCCGAGCCCACGAGACGCTACGCTATCTCGTATGCCGT49890.7057136067354699No Hit
CTCTTATACACATCTCCGAGCCCACGAGACGCTACGCTATCTCGTATGCCG19890.2813518468223791No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)